.. DO NOT EDIT.
.. THIS FILE WAS AUTOMATICALLY GENERATED BY SPHINX-GALLERY.
.. TO MAKE CHANGES, EDIT THE SOURCE PYTHON FILE:
.. "auto_examples/simple_surface_rendering/plot_volumetric_expanded.py"
.. LINE NUMBERS ARE GIVEN BELOW.

.. only:: html

    .. note::
        :class: sphx-glr-download-link-note

        :ref:`Go to the end <sphx_glr_download_auto_examples_simple_surface_rendering_plot_volumetric_expanded.py>`
        to download the full example code

.. rst-class:: sphx-glr-example-title

.. _sphx_glr_auto_examples_simple_surface_rendering_plot_volumetric_expanded.py:


================
How to move volumetric structures around
================
Function visualize_cifti_space has optional parameters to (1) expand all structures outwards, (2) separate left and right hemispheres, and (3) add an offset to all volumetric structures relative to cortical surface.
Null_color alpha value was set to 1 to make brain surface opaque.

.. GENERATED FROM PYTHON SOURCE LINES 8-28



.. image-sg:: /auto_examples/simple_surface_rendering/images/sphx_glr_plot_volumetric_expanded_001.png
   :alt: plot volumetric expanded
   :srcset: /auto_examples/simple_surface_rendering/images/sphx_glr_plot_volumetric_expanded_001.png
   :class: sphx-glr-single-img





.. code-block:: default

    import matplotlib.pyplot as plt
    from cerebro import cerebro_brain_utils as cbu
    from cerebro import cerebro_brain_viewer as cbv

    my_brain_viewer = cbv.Cerebro_brain_viewer(offscreen=True,null_color=(0.7,0.7,0.7,1))
    surface_model = my_brain_viewer.load_template_GIFTI_cortical_surface_models('pial')

    cifti_space = my_brain_viewer.visualize_cifti_space(
        volumetric_structures="all", 
        cifti_expansion_scale=40,
        cifti_left_right_seperation=20,
        volumetric_structure_offset=(0, 10, -80),
    )

    fig, ax = plt.subplots(figsize=(10,10))
    ax.axis('off')
    my_brain_viewer.offscreen_draw_to_matplotlib_axes(ax)

    # Clear this viewer
    my_brain_viewer.viewer.window.destroy()
    plt.show()

.. rst-class:: sphx-glr-timing

   **Total running time of the script:** ( 0 minutes  5.461 seconds)


.. _sphx_glr_download_auto_examples_simple_surface_rendering_plot_volumetric_expanded.py:

.. only:: html

  .. container:: sphx-glr-footer sphx-glr-footer-example




    .. container:: sphx-glr-download sphx-glr-download-python

      :download:`Download Python source code: plot_volumetric_expanded.py <plot_volumetric_expanded.py>`

    .. container:: sphx-glr-download sphx-glr-download-jupyter

      :download:`Download Jupyter notebook: plot_volumetric_expanded.ipynb <plot_volumetric_expanded.ipynb>`


.. only:: html

 .. rst-class:: sphx-glr-signature

    `Gallery generated by Sphinx-Gallery <https://sphinx-gallery.github.io>`_