:orphan:

Examples
==================
Examples demonstrating different visualizations possible with Cerebro Viewer.



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    <div class="sphx-glr-thumbnails">


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    </div>

Simple surface rendering
==================
Examples demonstrating simple surface rendering for combinations of the cortex, subcortex, brainstem, and cerebellum.


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    <div class="sphx-glr-thumbnails">


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    <div class="sphx-glr-thumbcontainer" tooltip="How to move volumetric structures around">

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  .. image:: /auto_examples/simple_surface_rendering/images/thumb/sphx_glr_plot_volumetric_expanded_thumb.png
    :alt:

  :ref:`sphx_glr_auto_examples_simple_surface_rendering_plot_volumetric_expanded.py`

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      <div class="sphx-glr-thumbnail-title">How to move volumetric structures around</div>
    </div>


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    <div class="sphx-glr-thumbcontainer" tooltip="Add scalar layer">

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  .. image:: /auto_examples/simple_surface_rendering/images/thumb/sphx_glr_plot_dscalar_thumb.png
    :alt:

  :ref:`sphx_glr_auto_examples_simple_surface_rendering_plot_dscalar.py`

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      <div class="sphx-glr-thumbnail-title">Add scalar layer</div>
    </div>


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    <div class="sphx-glr-thumbcontainer" tooltip="Camera usage">

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  .. image:: /auto_examples/simple_surface_rendering/images/thumb/sphx_glr_plot_camera_thumb.png
    :alt:

  :ref:`sphx_glr_auto_examples_simple_surface_rendering_plot_camera.py`

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      <div class="sphx-glr-thumbnail-title">Camera usage</div>
    </div>


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    <div class="sphx-glr-thumbcontainer" tooltip="This is a quick demo for how to plot a surface mesh rendering for the cortex, subcortex, cerebe...">

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  .. image:: /auto_examples/simple_surface_rendering/images/thumb/sphx_glr_plot_all_surfaces_thumb.png
    :alt:

  :ref:`sphx_glr_auto_examples_simple_surface_rendering_plot_all_surfaces.py`

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      <div class="sphx-glr-thumbnail-title">Cortex, subcortex, cerebellum, and brainstem surface rendering</div>
    </div>


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    </div>

Volumetric mask rendering
==================
Examples demonstrating a visualization of volumetric data in the form of 3D surfaces.



.. raw:: html

    <div class="sphx-glr-thumbnails">


.. raw:: html

    <div class="sphx-glr-thumbcontainer" tooltip="This is a quick demo showing how to plot a surface mesh generated from a volumetric mask.">

.. only:: html

  .. image:: /auto_examples/volume_surface_rendering/images/thumb/sphx_glr_plot_volumetric_mask_as_surface_thumb.png
    :alt:

  :ref:`sphx_glr_auto_examples_volume_surface_rendering_plot_volumetric_mask_as_surface.py`

.. raw:: html

      <div class="sphx-glr-thumbnail-title">Rendering volumetric masks as surfaces</div>
    </div>


.. raw:: html

    </div>


.. toctree::
   :hidden:
   :includehidden:


   /auto_examples/simple_surface_rendering/index.rst
   /auto_examples/volume_surface_rendering/index.rst


.. only:: html

  .. container:: sphx-glr-footer sphx-glr-footer-gallery

    .. container:: sphx-glr-download sphx-glr-download-python

      :download:`Download all examples in Python source code: auto_examples_python.zip </auto_examples/auto_examples_python.zip>`

    .. container:: sphx-glr-download sphx-glr-download-jupyter

      :download:`Download all examples in Jupyter notebooks: auto_examples_jupyter.zip </auto_examples/auto_examples_jupyter.zip>`


.. only:: html

 .. rst-class:: sphx-glr-signature

    `Gallery generated by Sphinx-Gallery <https://sphinx-gallery.github.io>`_